DatasetRNR_GSEA_DESEQ2_FC
PhenotypeNoPhenotypeAvailable
Upregulated in classna_pos
GeneSetKEGG_NEUROTROPHIN_SIGNALING_PATHWAY
Enrichment Score (ES)0.12605949
Normalized Enrichment Score (NES)1.6102055
Nominal p-value0.04192872
FDR q-value0.22866435
FWER p-Value0.981
Table: GSEA Results Summary



Fig 1: Enrichment plot: KEGG_NEUROTROPHIN_SIGNALING_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1IRS4812.3290.0036Yes
2BDNF3801.046-0.0045Yes
3CALML35210.869-0.0040Yes
4IRS29760.534-0.0206Yes
5BCL213640.382-0.0335Yes
6FASLG17590.300-0.0468Yes
7KIDINS22017630.300-0.0389Yes
8PIK3R118220.289-0.0341Yes
9CAMK419140.273-0.0310Yes
10NFKBIA19270.270-0.0236Yes
11GAB120410.257-0.0217Yes
12AKT320720.254-0.0154Yes
13IRAK322280.236-0.0157Yes
14FOXO324050.218-0.0173Yes
15MAP3K324180.216-0.0099Yes
16TRAF624410.214-0.0031Yes
17SOS227630.188-0.0124Yes
18IRS128930.179-0.0114Yes
19YWHAQ30380.170-0.0112Yes
20PIK3CA31030.167-0.0066Yes
21PTPN1132500.157-0.0065Yes
22CAMK2D35720.142-0.0159Yes
23PIK3R335800.141-0.0083Yes
24SHC436680.137-0.0050Yes
25RPS6KA238120.130-0.0047Yes
26BRAF38370.1290.0020Yes
27GSK3B38550.1280.0091Yes
28PIK3CG39560.1240.0117Yes
29CRK40170.1220.0164Yes
30FRS242190.1140.0136Yes
31RPS6KA644000.1080.0119Yes
32TP7345120.1040.0139Yes
33NTF346260.1000.0158Yes
34SORT147660.0950.0162Yes
35MAP3K147790.0950.0236Yes
36PIK3CB49650.0900.0216Yes
37MAPK151440.0850.0200Yes
38NTRK152720.0810.0211Yes
39MAPK1052730.0810.0291Yes
40MAPK852740.0810.0371Yes
41ZNF27453760.0780.0397Yes
42AKT154050.0780.0461Yes
43SH2B156860.0700.0390Yes
44YWHAE57770.0680.0422Yes
45MAP2K557810.0680.0500Yes
46SH2B358880.0650.0523Yes
47RHOA58890.0650.0603Yes
48PDK163610.0540.0428Yes
49PRDM465460.0490.0409Yes
50YWHAG66290.0480.0444Yes
51MAGED169540.0410.0349Yes
52KRAS69570.0410.0428Yes
53CALM370210.0390.0474Yes
54CAMK2A73970.0310.0352Yes
55PSEN174450.0300.0406Yes
56RAF174920.0290.0461Yes
57CALML675880.0270.0490Yes
58YWHAB75900.0270.0569Yes
59AKT277830.0230.0546Yes
60MAPK379500.0200.0536Yes
61RAP1A80060.0190.0586Yes
62SHC281500.0160.0589Yes
63SOS181850.0160.0651Yes
64RIPK283120.0130.0663Yes
65ABL184930.0090.0645Yes
66PLCG187280.0040.0599Yes
67CAMK2B89000.0010.0586Yes
68MAP3K58961-0.0000.0634Yes
69RAC19060-0.0020.0661Yes
70CALM19305-0.0070.0609Yes
71RPS6KA39328-0.0080.0677Yes
72CAMK2G9447-0.0100.0694Yes
73YWHAH9617-0.0130.0682Yes
74MAPK99679-0.0150.0729Yes
75NFKB19728-0.0160.0783Yes
76MAPK149949-0.0200.0744Yes
77HRAS10032-0.0210.0780Yes
78NGFRAP110257-0.0250.0739Yes
79CALM210416-0.0280.0734Yes
80CRKL10644-0.0330.0691Yes
81IKBKB10665-0.0330.0760Yes
82YWHAZ10718-0.0340.0812Yes
83RELA10805-0.0360.0846Yes
84MAPK710963-0.0410.0841Yes
85NRAS11153-0.0450.0819Yes
86RPS6KA511641-0.0560.0636Yes
87SHC311648-0.0570.0712Yes
88JUN11703-0.0580.0763Yes
89MAP2K212201-0.0700.0575Yes
90RAP1B12330-0.0730.0585Yes
91RAPGEF112367-0.0740.0646Yes
92NGFR12465-0.0760.0674Yes
93PIK3R512488-0.0770.0742Yes
94CDC4212574-0.0800.0776Yes
95ARHGDIA12785-0.0860.0742Yes
96NGF13059-0.0940.0675Yes
97NFKBIB13217-0.0990.0670Yes
98MAPKAPK213264-0.1010.0725Yes
99SHC113433-0.1060.0714Yes
100NTRK313453-0.1060.0784Yes
101MAP2K713571-0.1100.0801Yes
102GRB213603-0.1120.0864Yes
103MAPK1213645-0.1130.0922Yes
104IRAK413818-0.1200.0909Yes
105MAP2K114041-0.1310.0869Yes
106ATF414093-0.1330.0921Yes
107MAPK1314159-0.1360.0966Yes
108PLCG214313-0.1450.0964Yes
109IRAK214533-0.1550.0925Yes
110BAX14600-0.1580.0970Yes
111ARHGDIB14760-0.1680.0964Yes
112RPS6KA414855-0.1750.0993Yes
113NFKBIE14967-0.1830.1013Yes
114PRKCD14978-0.1830.1087Yes
115BAD15014-0.1870.1149Yes
116TP5315141-0.1960.1160Yes
117PIK3CD15256-0.2050.1179Yes
118CSK15348-0.2130.1210Yes
119NTRK215546-0.2320.1183Yes
120IRAK115778-0.2600.1138Yes
121RPS6KA115789-0.2610.1213Yes
122MAPK1115850-0.2690.1261Yes
123PIK3R216205-0.3180.1149No
124SH2B216682-0.4210.0972No
125NTF417538-0.7570.0590No
Table: GSEA details [plain text format]



Fig 2: KEGG_NEUROTROPHIN_SIGNALING_PATHWAY: Random ES distribution   
Gene set null distribution of ES for KEGG_NEUROTROPHIN_SIGNALING_PATHWAY